Program

This is only preliminary program and is subject to change. More details will be added as we get closer to the course start

Lectures start at 8.30 each day and ends at 17.00

Day 1 / November 25th
TimeDescriptionInstructor
08.30-09.00Introduction and FundamentalsLuis Mendoza
09.00-11.00Sequence Database Searching Formats, Pep3DLuis Mendoza
11.00-12.00GUI intro Search + conversion tutorialsLuis Mendoza
12.00-13.00Lunch-
13.00-15.30PeptideProphetLuis Mendoza
15.30-16.30InterProphetLuis Mendoza
16.30-17.00PTMProphetLuis Mendoza
Day 2 / November 26th
TimeDescriptionInstructor
08.30-09.30SpectraSTLuis Mendoza
09.30-12.00ProteinProphetLuis Mendoza
12.00-13.00Lunch-
13.00-16.00XPRESS / ASAPRatioLuis Mendoza
16.00-17.00LibraLuis Mendoza
Day 3 / November 27th
TimeDescriptionInstructor
08.30-09.30PIPE2Luis Mendoza
09.30-12.00PeptideAtlasLuis Mendoza
12.00-13.00Lunch-
13.00-14.00Label-free quantificataion and OpenMS LectureOliver Kohlbacher
14.00-17.00Label-free quantificataion and OpenMS ExerciseOliver Kohlbacher and Marc Rurik and Johannes Veit
Day 4 / November 28th
TimeDescriptionInstructor
08.30-12.00Full TPP end-to-end exerciseLuis Mendoza
12.00-13.00Lunch-
13.00-14.00General SRM intro lectureChristina Ludwig
14.00-16.00Tutorial on manual data analysis with SkylineOlga Schubert
16.00-17.00iRT and retention time normalizationOliver Rinner
18.00-Social event - Fajitas at Desperado-
Day 5 / November 29th
TimeDescriptionInstructor
08.30-09.30Free time / discussions-
09.30-12.00Finishing and discussion of the SRM tutorial, and Jeopardy gameAriel Bensimon
12.00-13.00Lunch-
13.00-15.00DIA/SWATH-MS lectureHannes Roest and George Rosenberger
15.00-17.00OpenSWATH tutorialHannes Roest and George Rosenberger